Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_01900 | Not Available | Positive | 405262 - 405699 | 15925.9 |
| hypothetical protein | C5L14_01905 | Not Available | Positive | 405723 - 406037 | 11289.8 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | C5L14_01910 | Not Available | Positive | 406024 - 408183 | 75992.1 |
| type ii and iii secretion system protein rhcc2 | C5L14_01915 | Not Available | Positive | 408269 - 409612 | 47826.4 |
| hypothetical protein | C5L14_01925 | Not Available | Negative | 410137 - 410961 | 27799.0 |
| translocation protein in type iii secretion system, rhcu | C5L14_01930 | Not Available | Positive | 411104 - 412147 | 37313.0 |
| peptidoglycan-binding protein lysm | C5L14_01935 | Not Available | Negative | 412325 - 415453 | 110546.0 |
| hypothetical protein | C5L14_01940 | Not Available | Negative | 415681 - 416136 | 16969.3 |
| aspartate aminotransferase family protein | C5L14_01945 | Not Available | Negative | 416324 - 417664 | 47462.6 |
| deor/glpr transcriptional regulator | C5L14_01950 | Not Available | Positive | 418018 - 418887 | 30879.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
