Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrpe/yscl family type iii secretion apparatus protein | C5L14_01850 | Not Available | Negative | 390181 - 390804 | 22395.4 |
| hypothetical protein | C5L14_01855 | Not Available | Negative | 390809 - 391423 | 21764.1 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C5L14_01860 | Not Available | Negative | 391420 - 392235 | 29687.5 |
| hypothetical protein | C5L14_01865 | Not Available | Negative | 392268 - 392702 | 14578.0 |
| hypothetical protein | C5L14_01870 | Not Available | Negative | 392753 - 392935 | 6552.55 |
| type iii secretion protein | C5L14_01875 | Not Available | Negative | 392932 - 393579 | 23290.1 |
| l,d-transpeptidase | C5L14_01880 | Not Available | Positive | 393955 - 394569 | 22289.4 |
| hypothetical protein | C5L14_01885 | Not Available | Negative | 395173 - 402780 | 268423.0 |
| murr/rpir family transcriptional regulator | C5L14_01890 | Not Available | Negative | 402864 - 403748 | 31923.5 |
| hypothetical protein | C5L14_01895 | Not Available | Positive | 404234 - 405265 | 36349.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
