Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | C5L14_01650 | Not Available | Negative | 340732 - 342348 | 56166.3 |
| urea abc transporter substrate-binding protein | C5L14_01655 | Not Available | Negative | 342399 - 343697 | 47042.1 |
| penicillin acylase family protein | C5L14_01660 | Not Available | Negative | 343947 - 346364 | 89040.6 |
| sugar kinase | C5L14_01665 | Not Available | Negative | 346614 - 347870 | 44532.5 |
| sugar abc transporter | C5L14_01670 | Not Available | Positive | 348176 - 349210 | 35917.1 |
| abc transporter permease | C5L14_01675 | Not Available | Positive | 349310 - 350392 | 37699.8 |
| sugar abc transporter atp-binding protein | C5L14_01680 | Not Available | Positive | 350392 - 351174 | 28238.7 |
| phosphogluconate dehydratase | C5L14_01685 | Not Available | Positive | 351270 - 353078 | 63085.0 |
| hlyd family secretion protein | C5L14_01690 | Not Available | Positive | 353295 - 354428 | 40127.6 |
| mfs transporter | C5L14_01695 | Not Available | Positive | 354425 - 356044 | 57779.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
