Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | C5L14_01550 | Not Available | Positive | 323482 - 323985 | 18680.3 |
| hypothetical protein | C5L14_01555 | Not Available | Negative | 324071 - 324571 | 17877.1 |
| ku protein | C5L14_01560 | Not Available | Positive | 324867 - 325736 | 32194.6 |
| dna ligase d | C5L14_01565 | Not Available | Positive | 325738 - 328275 | 93563.9 |
| ku protein | C5L14_01570 | Not Available | Negative | 328306 - 329097 | 30034.0 |
| hypothetical protein | C5L14_01575 | Not Available | Negative | 329189 - 329545 | 12820.0 |
| hypothetical protein | C5L14_01580 | Not Available | Positive | 329607 - 330050 | 16136.5 |
| transporter | C5L14_01585 | Not Available | Negative | 330195 - 331133 | 32630.2 |
| lysr family transcriptional regulator | C5L14_01590 | Not Available | Positive | 331226 - 332143 | 33647.1 |
| urease accessory protein ureg | C5L14_01595 | Not Available | Negative | 332297 - 332932 | 22702.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
