Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aa3-type cytochrome c oxidase subunit iv | C5L14_01500 | Not Available | Negative | 317264 - 317542 | 9739.21 |
| uracil-dna glycosylase | C5L14_01505 | Not Available | Negative | 317775 - 318443 | 24553.5 |
| plasmid stabilization protein | C5L14_01510 | Not Available | Negative | 318670 - 318984 | 10886.4 |
| protease | C5L14_01515 | Not Available | Positive | 319155 - 319718 | 20596.3 |
| hypothetical protein | C5L14_01520 | Not Available | Negative | 319719 - 320720 | 37286.2 |
| duf3309 domain-containing protein | C5L14_01525 | Not Available | Negative | 321125 - 321280 | 5550.31 |
| hypothetical protein | C5L14_01530 | Not Available | Positive | 321502 - 321777 | 10029.8 |
| csbd family protein | C5L14_01535 | Not Available | Positive | 321842 - 322048 | 8209.54 |
| hypothetical protein | C5L14_01540 | Not Available | Negative | 322131 - 322337 | 7966.26 |
| duf72 domain-containing protein | C5L14_01545 | Not Available | Negative | 322375 - 323271 | 34027.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
