Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5L14_14215 | Not Available | Negative | 3113879 - 3114826 | 34027.9 |
| qace family quaternary ammonium compound efflux smr transporter | C5L14_14220 | Not Available | Positive | 3115036 - 3115353 | 10886.8 |
| hypothetical protein | C5L14_14225 | Not Available | Negative | 3115388 - 3115924 | 18758.8 |
| phosphoribosylformylglycinamidine synthase | C5L14_14230 | Not Available | Negative | 3115924 - 3116163 | 8368.16 |
| rna--nad 2'-phosphotransferase | C5L14_14235 | Not Available | Negative | 3116228 - 3116800 | 20844.7 |
| hypothetical protein | C5L14_14240 | Not Available | Negative | 3116879 - 3117373 | 17569.2 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | C5L14_14245 | Not Available | Negative | 3117439 - 3118203 | 29073.2 |
| duf1476 domain-containing protein | C5L14_14250 | Not Available | Positive | 3118565 - 3118888 | 11890.0 |
| hydroxyacid aldolase | C5L14_14255 | Not Available | Positive | 3118957 - 3119751 | 27535.8 |
| alpha/beta hydrolase | C5L14_14260 | Not Available | Negative | 3119905 - 3120468 | 20700.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
