Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa epimerase | C5L14_14065 | Not Available | Positive | 3087266 - 3087670 | 14503.5 |
| dead/deah box helicase | C5L14_14070 | Not Available | Negative | 3087761 - 3089188 | 52209.8 |
| hypothetical protein | C5L14_14075 | Not Available | Negative | 3089653 - 3090222 | 19770.8 |
| hit family protein | C5L14_14080 | Not Available | Negative | 3090453 - 3090866 | 15088.4 |
| gnat family n-acetyltransferase | C5L14_14085 | Not Available | Negative | 3090871 - 3092109 | 45872.7 |
| hypothetical protein | C5L14_14090 | Not Available | Negative | 3092215 - 3092682 | 15993.5 |
| nadp-dependent isocitrate dehydrogenase | C5L14_14095 | Not Available | Negative | 3092797 - 3094008 | 45201.0 |
| glutathione s-transferase | C5L14_14100 | Not Available | Negative | 3094122 - 3094766 | 23480.1 |
| nadp-dependent isocitrate dehydrogenase | C5L14_14105 | Not Available | Negative | 3094981 - 3097221 | 82118.9 |
| hypothetical protein | C5L14_14110 | Not Available | Negative | 3097603 - 3097851 | 9440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
