Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-succinyltransferase | C5L14_13965 | Not Available | Negative | 3061542 - 3062465 | 35666.3 |
| methionine synthase | C5L14_13970 | Not Available | Negative | 3062669 - 3066439 | 137312.0 |
| hypothetical protein | C5L14_13975 | Not Available | Negative | 3066626 - 3066931 | 11075.1 |
| hybrid-cluster nad(p)-dependent oxidoreductase | C5L14_13980 | Not Available | Negative | 3066933 - 3068021 | 39916.9 |
| rieske (2fe-2s) protein | C5L14_13985 | Not Available | Negative | 3068183 - 3069427 | 46370.0 |
| fumarate hydratase | C5L14_13990 | Not Available | Positive | 3069932 - 3071572 | 59309.2 |
| hypothetical protein | C5L14_13995 | Not Available | Positive | 3071859 - 3073112 | 44704.4 |
| nad(p)-dependent oxidoreductase | C5L14_14000 | Not Available | Negative | 3073182 - 3074099 | 32302.8 |
| recombinase reca | C5L14_14005 | Not Available | Positive | 3074426 - 3075499 | 38333.2 |
| alanine--trna ligase | C5L14_14010 | Not Available | Positive | 3075819 - 3078470 | 95486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
