Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_13755 | Not Available | Negative | 3017478 - 3017936 | 17194.1 |
| flavin-nucleotide-binding protein | C5L14_13760 | Not Available | Negative | 3018106 - 3018855 | 27594.7 |
| plp-dependent aminotransferase family protein | C5L14_13765 | Not Available | Positive | 3018968 - 3020368 | 50175.8 |
| aldehyde-activating protein | C5L14_13770 | Not Available | Negative | 3020380 - 3020727 | 12665.1 |
| rlua family pseudouridine synthase | C5L14_13775 | Not Available | Positive | 3020981 - 3021976 | 36686.2 |
| hypothetical protein | C5L14_13780 | Not Available | Positive | 3021980 - 3022657 | 24207.1 |
| atpase | C5L14_13785 | Not Available | Positive | 3022654 - 3023439 | 28568.5 |
| aminotransferase | C5L14_13790 | Not Available | Negative | 3023531 - 3024808 | 45777.0 |
| c4-dicarboxylate abc transporter | C5L14_13795 | Not Available | Negative | 3024898 - 3026727 | 65623.5 |
| hypothetical protein | C5L14_13800 | Not Available | Negative | 3026727 - 3027392 | 24394.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
