Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5L14_13405 | Not Available | Negative | 2947475 - 2948359 | 32561.0 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C5L14_13410 | Not Available | Positive | 2948532 - 2950031 | 53262.1 |
| aldehyde dehydrogenase family protein | C5L14_13415 | Not Available | Negative | 2950171 - 2951595 | 51162.2 |
| gamma-glutamylputrescine oxidoreductase | C5L14_13420 | Not Available | Negative | 2951851 - 2953194 | 47899.3 |
| glutamine synthetase | C5L14_13425 | Not Available | Negative | 2953267 - 2954634 | 49237.8 |
| gntr family transcriptional regulator | C5L14_13430 | Not Available | Positive | 2954749 - 2955444 | 25255.8 |
| histidine kinase | C5L14_13435 | Not Available | Negative | 2955465 - 2956895 | 54536.1 |
| nucleoside deaminase | C5L14_13440 | Not Available | Negative | 2957178 - 2957687 | 18159.3 |
| sensor histidine kinase | C5L14_13445 | Not Available | Negative | 2957815 - 2959188 | 49015.3 |
| dna-binding response regulator | C5L14_13450 | Not Available | Negative | 2959175 - 2959840 | 24589.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
