Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit ii | C5L14_13105 | Not Available | Positive | 2885397 - 2886239 | 31208.2 |
| cytochrome c oxidase subunit i | C5L14_13110 | Not Available | Positive | 2886273 - 2887904 | 59876.8 |
| protoheme ix farnesyltransferase | C5L14_13115 | Not Available | Positive | 2888088 - 2889005 | 32378.7 |
| coxf protein | C5L14_13120 | Not Available | Positive | 2889062 - 2889247 | 6852.52 |
| cytochrome c oxidase assembly protein | C5L14_13125 | Not Available | Positive | 2889249 - 2889869 | 22131.4 |
| cytochrome c oxidase subunit 3 | C5L14_13130 | Not Available | Positive | 2889901 - 2890737 | 31349.2 |
| hypothetical protein | C5L14_13135 | Not Available | Positive | 2890802 - 2891179 | 13556.7 |
| surfeit 1 | C5L14_13140 | Not Available | Positive | 2891176 - 2891931 | 27439.0 |
| threonine synthase | C5L14_13145 | Not Available | Positive | 2892212 - 2893624 | 50999.2 |
| peptidase m16 | C5L14_13150 | Not Available | Positive | 2893621 - 2894880 | 44763.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
