Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | C5L14_13005 | Not Available | Positive | 2862413 - 2863312 | 32856.2 |
| 4-hydroxybenzoate octaprenyltransferase | C5L14_13010 | Not Available | Negative | 2863321 - 2864283 | 34030.7 |
| hypothetical protein | C5L14_13015 | Not Available | Negative | 2864299 - 2864763 | 16882.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | C5L14_13020 | Not Available | Positive | 2864986 - 2865723 | 26630.1 |
| glutamate--cysteine ligase | C5L14_13025 | Not Available | Positive | 2865961 - 2867331 | 51081.2 |
| aromatic amino acid lyase | C5L14_13030 | Not Available | Negative | 2867554 - 2869374 | 66883.8 |
| eama family transporter | C5L14_13035 | Not Available | Positive | 2869649 - 2870572 | 32183.2 |
| sugar kinase | C5L14_13040 | Not Available | Positive | 2870700 - 2871917 | 42623.6 |
| peroxidase | C5L14_13045 | Not Available | Positive | 2872172 - 2874004 | 68444.1 |
| hypothetical protein | C5L14_13050 | Not Available | Positive | 2874006 - 2874905 | 32160.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
