Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2093 domain-containing protein | C5L14_12905 | Not Available | Positive | 2844974 - 2845195 | 8478.09 |
| tetraacyldisaccharide 4'-kinase | C5L14_12910 | Not Available | Negative | 2845293 - 2846291 | 34637.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | C5L14_12915 | Not Available | Negative | 2846312 - 2847592 | 45569.6 |
| hypothetical protein | C5L14_12920 | Not Available | Negative | 2847589 - 2848293 | 25185.7 |
| duf4170 domain-containing protein | C5L14_12925 | Not Available | Negative | 2848300 - 2848545 | 9046.79 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C5L14_12930 | Not Available | Negative | 2848664 - 2849482 | 28517.0 |
| gnat family n-acetyltransferase | C5L14_12935 | Not Available | Negative | 2849560 - 2850078 | 19342.9 |
| polyketide cyclase | C5L14_12940 | Not Available | Positive | 2850325 - 2850690 | 13321.5 |
| transcriptional regulator | C5L14_12945 | Not Available | Positive | 2850687 - 2851529 | 30817.2 |
| antibiotic biosynthesis monooxygenase | C5L14_12950 | Not Available | Negative | 2851913 - 2852248 | 12712.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
