Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | C5L14_12300 | Not Available | Negative | 2709413 - 2710615 | 43221.3 |
| tlya family rrna (cytidine-2'-o)-methyltransferase | C5L14_12305 | Not Available | Negative | 2710713 - 2711462 | 26124.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | C5L14_12310 | Not Available | Negative | 2711462 - 2713381 | 68376.0 |
| exodeoxyribonuclease vii small subunit | C5L14_12315 | Not Available | Negative | 2713516 - 2713764 | 8825.68 |
| hypothetical protein | C5L14_12320 | Not Available | Positive | 2714001 - 2715539 | 54867.2 |
| dihydroorotase | C5L14_12325 | Not Available | Negative | 2715564 - 2716889 | 48478.8 |
| folate-binding protein | C5L14_12330 | Not Available | Positive | 2717179 - 2718024 | 30055.0 |
| hypothetical protein | C5L14_12335 | Not Available | Positive | 2718360 - 2718950 | 22963.2 |
| alkane 1-monooxygenase | C5L14_12340 | Not Available | Negative | 2718932 - 2719942 | 35720.0 |
| dna-3-methyladenine glycosylase i | C5L14_12345 | Not Available | Positive | 2720091 - 2720708 | 23363.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
