Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | C5L14_12000 | Not Available | Negative | 2656413 - 2657015 | 21611.8 |
| excinuclease abc subunit c | C5L14_12005 | Not Available | Negative | 2657056 - 2659026 | 72511.7 |
| short chain dehydrogenase | C5L14_12010 | Not Available | Negative | 2659128 - 2659901 | 26941.3 |
| hypothetical protein | C5L14_12015 | Not Available | Positive | 2660148 - 2660612 | 15801.8 |
| hypothetical protein | C5L14_12020 | Not Available | Positive | 2660837 - 2661523 | 24962.0 |
| eama family transporter | C5L14_12025 | Not Available | Negative | 2661591 - 2662487 | 30721.5 |
| transcriptional regulator | C5L14_12030 | Not Available | Positive | 2662610 - 2663305 | 26725.7 |
| glutathione s-transferase | C5L14_12035 | Not Available | Negative | 2663554 - 2664156 | 21836.4 |
| cold-shock protein | C5L14_12040 | Not Available | Negative | 2664247 - 2664459 | 7416.8 |
| mbl fold metallo-hydrolase | C5L14_12045 | Not Available | Positive | 2664622 - 2665530 | 31769.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
