Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 family rnd transporter | C5L14_01050 | Not Available | Positive | 217309 - 220479 | 112853.0 |
| glutathione s-transferase | C5L14_01055 | Not Available | Negative | 220490 - 221161 | 24928.8 |
| lysr family transcriptional regulator | C5L14_01060 | Not Available | Positive | 221230 - 222219 | 35955.3 |
| dna-binding response regulator | C5L14_01065 | Not Available | Positive | 222611 - 223330 | 26731.4 |
| two-component sensor histidine kinase | C5L14_01070 | Not Available | Positive | 223327 - 224775 | 52654.6 |
| hypothetical protein | C5L14_01075 | Not Available | Negative | 224929 - 225225 | 10233.4 |
| hypothetical protein | C5L14_01080 | Not Available | Negative | 225953 - 227023 | 38027.4 |
| diaminobutyrate--2-oxoglutarate transaminase | C5L14_01085 | Not Available | Negative | 227007 - 228287 | 46146.1 |
| hypothetical protein | C5L14_01090 | Not Available | Negative | 228419 - 230002 | 58746.6 |
| ornithine monooxygenase | C5L14_01095 | Not Available | Negative | 229878 - 231236 | 49729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
