Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | C5L14_10970 | Not Available | Negative | 2424215 - 2425666 | 50427.6 |
| penicillin-binding protein | C5L14_10975 | Not Available | Negative | 2425795 - 2427591 | 65259.3 |
| hypothetical protein | C5L14_10980 | Not Available | Negative | 2427603 - 2427959 | 12795.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | C5L14_10985 | Not Available | Negative | 2427956 - 2428993 | 36949.3 |
| hypothetical protein | C5L14_10990 | Not Available | Positive | 2429245 - 2430279 | 37086.2 |
| transglutaminase | C5L14_10995 | Not Available | Negative | 2430325 - 2431155 | 30975.7 |
| helix-turn-helix transcriptional regulator | C5L14_11000 | Not Available | Negative | 2431302 - 2432831 | 56792.2 |
| csbd family protein | C5L14_11005 | Not Available | Negative | 2432993 - 2433175 | 6158.37 |
| glsb/yeaq/ymge family stress response membrane protein | C5L14_11010 | Not Available | Negative | 2433378 - 2433629 | 8709.96 |
| n-acetylmuramoyl-l-alanine amidase | C5L14_11020 | Not Available | Negative | 2434518 - 2435417 | 32608.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
