Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_10570 | Not Available | Positive | 2329824 - 2330021 | 7035.52 |
| rpir family transcriptional regulator | C5L14_10575 | Not Available | Positive | 2330196 - 2331029 | 29878.7 |
| inositol 2-dehydrogenase | C5L14_10580 | Not Available | Negative | 2331167 - 2332153 | 34736.6 |
| 5-dehydro-2-deoxygluconokinase | C5L14_10585 | Not Available | Positive | 2332529 - 2334448 | 69096.9 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | C5L14_10590 | Not Available | Positive | 2334615 - 2336441 | 64525.8 |
| myo-inosose-2 dehydratase | C5L14_10595 | Not Available | Positive | 2336557 - 2337447 | 32111.0 |
| 5-deoxy-glucuronate isomerase | C5L14_10600 | Not Available | Positive | 2337753 - 2338547 | 28730.7 |
| porin family protein | C5L14_10605 | Not Available | Positive | 2338943 - 2339707 | 28012.7 |
| methyltransferase, tigr04325 family | C5L14_10610 | Not Available | Positive | 2340033 - 2340869 | 31414.2 |
| hypothetical protein | C5L14_10615 | Not Available | Positive | 2341260 - 2342156 | 33630.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
