Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit iii | C5L14_01000 | Not Available | Negative | 206713 - 207582 | 31367.1 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | C5L14_01005 | Not Available | Negative | 207586 - 207756 | 6325.5 |
| cytochrome-c oxidase, cbb3-type subunit ii | C5L14_01010 | Not Available | Negative | 207758 - 208510 | 27395.7 |
| cytochrome-c oxidase, cbb3-type subunit i | C5L14_01015 | Not Available | Negative | 208515 - 210188 | 62204.9 |
| phosphodiesterase | C5L14_01020 | Not Available | Negative | 210567 - 211364 | 29592.5 |
| hypothetical protein | C5L14_01025 | Not Available | Negative | 211429 - 211935 | 18865.1 |
| aspartate/glutamate racemase family protein | C5L14_01030 | Not Available | Negative | 212316 - 213047 | 26384.7 |
| sodium:dicarboxylate symporter | C5L14_01035 | Not Available | Negative | 213044 - 214420 | 48646.5 |
| abc transporter substrate-binding protein | C5L14_01040 | Not Available | Negative | 214425 - 215285 | 31185.5 |
| efflux transporter periplasmic adaptor subunit | C5L14_01045 | Not Available | Positive | 216124 - 217305 | 41572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
