Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | C5L14_10470 | Not Available | Negative | 2308356 - 2310506 | 73416.3 |
| hypothetical protein | C5L14_10475 | Not Available | Positive | 2310916 - 2312463 | 54383.4 |
| thiamine-phosphate kinase | C5L14_10480 | Not Available | Negative | 2312538 - 2313524 | 34464.9 |
| transcription antitermination factor nusb | C5L14_10485 | Not Available | Negative | 2313539 - 2314000 | 17143.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | C5L14_10490 | Not Available | Negative | 2313997 - 2314524 | 18089.6 |
| riboflavin synthase | C5L14_10495 | Not Available | Negative | 2314682 - 2315311 | 22200.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C5L14_10500 | Not Available | Negative | 2315322 - 2316461 | 40003.5 |
| transcriptional regulator nrdr | C5L14_10505 | Not Available | Negative | 2316581 - 2317057 | 17997.3 |
| serine hydroxymethyltransferase | C5L14_10510 | Not Available | Negative | 2317155 - 2318450 | 46430.2 |
| murein l,d-transpeptidase | C5L14_10515 | Not Available | Negative | 2318633 - 2319877 | 45616.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
