Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | C5L14_10320 | Not Available | Negative | 2276630 - 2277679 | 36839.3 |
| lps-assembly protein lptd | C5L14_10325 | Not Available | Negative | 2277750 - 2280206 | 91551.2 |
| lps export abc transporter permease lptg | C5L14_10330 | Not Available | Negative | 2280206 - 2281282 | 38575.3 |
| lps export abc transporter permease lptf | C5L14_10335 | Not Available | Negative | 2281282 - 2282448 | 41906.2 |
| leucyl aminopeptidase | C5L14_10340 | Not Available | Positive | 2282625 - 2284121 | 52713.6 |
| glutathione s-transferase family protein | C5L14_10345 | Not Available | Positive | 2284058 - 2284738 | 25060.3 |
| dna polymerase iii subunit chi | C5L14_10350 | Not Available | Positive | 2284752 - 2285198 | 16745.7 |
| amino acid abc transporter | C5L14_10355 | Not Available | Positive | 2285501 - 2286319 | 29062.9 |
| amino acid abc transporter | C5L14_10360 | Not Available | Positive | 2286470 - 2287117 | 22596.6 |
| amino acid abc transporter permease | C5L14_10365 | Not Available | Positive | 2287117 - 2287773 | 24342.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
