Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine deaminase | C5L14_10270 | Not Available | Positive | 2265579 - 2267282 | 60578.4 |
| nad(p)h dehydrogenase | C5L14_10275 | Not Available | Positive | 2267470 - 2268066 | 22695.8 |
| [acyl-carrier-protein] s-malonyltransferase | C5L14_10280 | Not Available | Positive | 2268304 - 2269248 | 32101.7 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | C5L14_10285 | Not Available | Positive | 2269353 - 2270090 | 25387.9 |
| acyl carrier protein | C5L14_10290 | Not Available | Positive | 2270334 - 2270570 | 8443.88 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | C5L14_10295 | Not Available | Positive | 2270827 - 2272086 | 43964.3 |
| endolytic transglycosylase mltg | C5L14_10300 | Not Available | Positive | 2272531 - 2273961 | 49972.5 |
| yicc family protein | C5L14_10305 | Not Available | Positive | 2274123 - 2275010 | 31811.1 |
| guanylate kinase | C5L14_10310 | Not Available | Positive | 2275007 - 2275672 | 24818.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | C5L14_10315 | Not Available | Negative | 2275681 - 2276523 | 30038.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
