Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | C5L14_00950 | Not Available | Positive | 195193 - 195699 | 19066.9 |
| iron dicitrate transport regulator fecr | C5L14_00955 | Not Available | Positive | 195849 - 196811 | 34198.0 |
| tonb-dependent siderophore receptor | C5L14_00960 | Not Available | Positive | 197037 - 199430 | 85801.9 |
| abc transporter substrate-binding protein | C5L14_00965 | Not Available | Positive | 199420 - 200370 | 33972.1 |
| fe(3+)-hydroxamate abc transporter permease fhub | C5L14_00970 | Not Available | Positive | 200348 - 202351 | 67812.3 |
| esterase | C5L14_00975 | Not Available | Positive | 202306 - 203205 | 32141.4 |
| cbb3-type cytochrome oxidase assembly protein ccos | C5L14_00980 | Not Available | Negative | 203265 - 203465 | 6951.23 |
| nitrogen fixation protein fixi | C5L14_00985 | Not Available | Negative | 203462 - 205711 | 78769.6 |
| hypothetical protein | C5L14_00990 | Not Available | Negative | 205708 - 206493 | 28253.6 |
| hypothetical protein | C5L14_00995 | Not Available | Negative | 206507 - 206716 | 7069.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
