Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter atp-binding protein | C5L14_09965 | Not Available | Positive | 2189224 - 2190279 | 37752.5 |
| glycoside hydrolase family 37 | C5L14_09970 | Not Available | Positive | 2190282 - 2192519 | 81471.4 |
| multidrug abc transporter atp-binding protein | C5L14_09975 | Not Available | Negative | 2192602 - 2194461 | 67999.9 |
| glycerate kinase | C5L14_09980 | Not Available | Negative | 2194639 - 2195928 | 43653.9 |
| hypothetical protein | C5L14_09985 | Not Available | Negative | 2196120 - 2196743 | 23083.3 |
| eama family transporter | C5L14_09990 | Not Available | Positive | 2196841 - 2197773 | 32646.7 |
| Trna-val | Not Available | Not Available | Positive | 2198516 - 2198590 | Not Available |
| phosphoglycolate phosphatase | C5L14_10000 | Not Available | Negative | 2198605 - 2199303 | 25080.0 |
| hypothetical protein | C5L14_10005 | Not Available | Positive | 2199500 - 2199853 | 12627.1 |
| ribose 5-phosphate isomerase a | C5L14_10010 | Not Available | Positive | 2200079 - 2200777 | 23948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
