Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | C5L14_09615 | Not Available | Positive | 2111419 - 2112417 | 35435.6 |
| dihydropyrimidinase | C5L14_09620 | Not Available | Positive | 2112638 - 2114092 | 53068.2 |
| duf1349 domain-containing protein | C5L14_09625 | Not Available | Positive | 2114305 - 2114943 | 23637.9 |
| zn-dependent hydrolase | C5L14_09630 | Not Available | Positive | 2114962 - 2116203 | 45221.9 |
| thioesterase | C5L14_09635 | Not Available | Positive | 2116396 - 2116854 | 16379.8 |
| hypothetical protein | C5L14_09640 | Not Available | Negative | 2116877 - 2117665 | 28130.5 |
| hypothetical protein | C5L14_09645 | Not Available | Negative | 2117689 - 2118279 | 21169.9 |
| aldo/keto reductase | C5L14_09650 | Not Available | Negative | 2119033 - 2120019 | 35629.3 |
| lysr family transcriptional regulator | C5L14_09655 | Not Available | Positive | 2120164 - 2121081 | 33533.2 |
| threo-3-hydroxy-l-aspartate ammonia-lyase | C5L14_09660 | Not Available | Negative | 2121095 - 2122063 | 34927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
