Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | C5L14_00900 | Not Available | Negative | 183444 - 185063 | 59371.4 |
| abc transporter permease | C5L14_00905 | Not Available | Negative | 185056 - 185979 | 33888.7 |
| abc transporter permease | C5L14_00910 | Not Available | Negative | 185991 - 186905 | 32863.5 |
| peptide abc transporter substrate-binding protein | C5L14_00915 | Not Available | Negative | 187007 - 188506 | 55308.4 |
| glycosyl hydrolase | C5L14_00920 | Not Available | Positive | 188741 - 189937 | 43840.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | C5L14_00925 | Not Available | Positive | 189934 - 190890 | 33435.1 |
| alcohol dehydrogenase | C5L14_00930 | Not Available | Positive | 190894 - 192012 | 38414.3 |
| gntr family transcriptional regulator | C5L14_00935 | Not Available | Negative | 192026 - 192727 | 26114.2 |
| hrp-dependent type iii effector protein | C5L14_00940 | Not Available | Negative | 192731 - 193756 | 35439.8 |
| hypothetical protein | C5L14_00945 | Not Available | Positive | 194376 - 194933 | 20039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
