Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C5L14_09510 | Not Available | Positive | 2087085 - 2088581 | 53082.6 |
| enoyl-coa hydratase | C5L14_09515 | Not Available | Negative | 2088694 - 2089467 | 27488.3 |
| 3-hydroxyisobutyrate dehydrogenase | C5L14_09520 | Not Available | Negative | 2089477 - 2090364 | 29762.9 |
| 3-hydroxyisobutyryl-coa hydrolase | C5L14_09525 | Not Available | Negative | 2090422 - 2091486 | 37917.7 |
| acyl-coa dehydrogenase | C5L14_09530 | Not Available | Negative | 2091486 - 2092628 | 40922.0 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | C5L14_09535 | Not Available | Negative | 2092816 - 2094312 | 53678.3 |
| amp-dependent synthetase | C5L14_09540 | Not Available | Negative | 2094445 - 2096166 | 63408.6 |
| acetyl-coa c-acyltransferase | C5L14_09545 | Not Available | Negative | 2096240 - 2097424 | 40564.6 |
| 3-hydroxyacyl-coa dehydrogenase | C5L14_09550 | Not Available | Negative | 2097485 - 2098252 | 26402.8 |
| arac family transcriptional regulator | C5L14_09555 | Not Available | Positive | 2098582 - 2099571 | 37156.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
