Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccmh | C5L14_09360 | Not Available | Positive | 2048932 - 2049390 | 16636.4 |
| serine peptidase | C5L14_09365 | Not Available | Positive | 2049613 - 2051148 | 52958.8 |
| dna-binding response regulator | C5L14_09370 | Not Available | Positive | 2051394 - 2052074 | 25329.6 |
| two-component sensor histidine kinase | C5L14_09375 | Not Available | Positive | 2052249 - 2053697 | 52375.2 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | C5L14_09380 | Not Available | Positive | 2053836 - 2056733 | 104882.0 |
| atp-dependent clp protease adaptor clps | C5L14_09385 | Not Available | Positive | 2056866 - 2057171 | 11728.1 |
| hypothetical protein | C5L14_09390 | Not Available | Positive | 2057168 - 2057386 | 7534.71 |
| pas domain-containing sensor histidine kinase | C5L14_09395 | Not Available | Negative | 2057424 - 2059604 | 79802.2 |
| aminopeptidase n | C5L14_09400 | Not Available | Negative | 2060076 - 2062697 | 97332.9 |
| tetr/acrr family transcriptional regulator | C5L14_09405 | Not Available | Negative | 2062881 - 2063447 | 20314.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
