Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycgn family cysteine cluster protein | C5L14_09310 | Not Available | Positive | 2038880 - 2039359 | 18360.6 |
| hypothetical protein | C5L14_09315 | Not Available | Negative | 2040149 - 2041006 | 31148.8 |
| peptidase s1 | C5L14_09320 | Not Available | Negative | 2041040 - 2041894 | 29258.9 |
| hypothetical protein | C5L14_09325 | Not Available | Positive | 2042072 - 2042380 | 10447.0 |
| dna-binding response regulator | C5L14_09330 | Not Available | Positive | 2042391 - 2043065 | 25369.6 |
| atp-binding protein | C5L14_09335 | Not Available | Positive | 2043062 - 2044486 | 51168.8 |
| hypothetical protein | C5L14_09340 | Not Available | Positive | 2044759 - 2045157 | 13530.0 |
| c-type cytochrome biogenesis protein ccmi | C5L14_09345 | Not Available | Positive | 2045367 - 2046494 | 40267.1 |
| cytochrome c maturation protein ccme | C5L14_09350 | Not Available | Positive | 2046491 - 2046946 | 15931.2 |
| heme lyase nrfefg subunit nrfe | C5L14_09355 | Not Available | Positive | 2046943 - 2048928 | 71055.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
