Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | C5L14_00850 | Not Available | Negative | 173231 - 174031 | 29334.2 |
| fatty acid desaturase | C5L14_00855 | Not Available | Negative | 174041 - 175147 | 42799.1 |
| duf4432 domain-containing protein | C5L14_00860 | Not Available | Negative | 175202 - 176383 | 44096.5 |
| sugar abc transporter atp-binding protein | C5L14_00865 | Not Available | Negative | 176386 - 177168 | 28028.1 |
| abc transporter permease | C5L14_00870 | Not Available | Negative | 177168 - 178172 | 34978.5 |
| abc transporter substrate-binding protein | C5L14_00875 | Not Available | Negative | 178227 - 179165 | 32616.9 |
| sugar phosphate isomerase/epimerase | C5L14_00880 | Not Available | Negative | 179184 - 180098 | 34525.8 |
| oxidoreductase | C5L14_00885 | Not Available | Negative | 180135 - 181226 | 40414.4 |
| laci family transcriptional regulator | C5L14_00890 | Not Available | Positive | 181480 - 182502 | 36996.3 |
| dihydrodipicolinate synthase family protein | C5L14_00895 | Not Available | Negative | 182533 - 183414 | 31605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
