Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | C5L14_08895 | Not Available | Negative | 1939899 - 1940963 | 38428.3 |
| type vi secretion system atpase tssh | C5L14_08900 | Not Available | Positive | 1941335 - 1944109 | 98782.8 |
| hcp1 family type vi secretion system effector | C5L14_08905 | Not Available | Positive | 1944152 - 1944628 | 17300.1 |
| hypothetical protein | C5L14_08910 | Not Available | Positive | 1944749 - 1945345 | 22057.7 |
| type vi secretion system tip protein vgrg | C5L14_08915 | Not Available | Positive | 1945430 - 1947787 | 84313.6 |
| duf2169 domain-containing protein | C5L14_08920 | Not Available | Positive | 1947793 - 1948914 | 41842.3 |
| hypothetical protein | C5L14_08925 | Not Available | Positive | 1948911 - 1950350 | 52589.6 |
| hypothetical protein | C5L14_08930 | Not Available | Positive | 1950370 - 1951068 | 26282.2 |
| hypothetical protein | C5L14_08945 | Not Available | Positive | 1954223 - 1954597 | 14791.5 |
| amine oxidase | C5L14_08950 | Not Available | Positive | 1954804 - 1956468 | 60852.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
