Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylpyrophosphate synthetase | C5L14_08640 | Not Available | Negative | 1889030 - 1889998 | 34736.1 |
| xaa-pro dipeptidase | C5L14_08645 | Not Available | Negative | 1890156 - 1891304 | 41702.5 |
| peptidoglycan editing factor pgef | C5L14_08650 | Not Available | Negative | 1891432 - 1892202 | 27678.9 |
| duf992 domain-containing protein | C5L14_08655 | Not Available | Positive | 1892405 - 1892974 | 19446.5 |
| methyltransferase | C5L14_08660 | Not Available | Negative | 1893047 - 1894135 | 38628.4 |
| prolipoprotein diacylglyceryl transferase | C5L14_08665 | Not Available | Negative | 1894132 - 1894992 | 31325.6 |
| hypothetical protein | C5L14_08670 | Not Available | Positive | 1895264 - 1895518 | 9709.57 |
| hypothetical protein | C5L14_08675 | Not Available | Positive | 1895697 - 1896197 | 18728.2 |
| pyrroline-5-carboxylate reductase | C5L14_08680 | Not Available | Positive | 1896372 - 1897199 | 27612.8 |
| pp_01728 | C5L14_08690 | Not Available | Positive | 1898036 - 1898398 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
