Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_08035 | Not Available | Positive | 1760913 - 1762085 | 43175.6 |
| glyoxalase | C5L14_08040 | Not Available | Positive | 1762258 - 1762647 | 14435.2 |
| pseudouridine-5-phosphate glycosidase | C5L14_08045 | Not Available | Negative | 1762692 - 1763591 | 30860.3 |
| carbohydrate kinase | C5L14_08050 | Not Available | Negative | 1763588 - 1764547 | 32907.9 |
| lytic transglycosylase | C5L14_08055 | Not Available | Positive | 1764764 - 1765726 | 34632.0 |
| basic amino acid abc transporter substrate-binding protein | C5L14_08060 | Not Available | Positive | 1765896 - 1766708 | 29137.8 |
| amino acid abc transporter | C5L14_08065 | Not Available | Positive | 1766798 - 1767631 | 30363.9 |
| transcriptional regulator ftra | C5L14_08070 | Not Available | Positive | 1767762 - 1768760 | 36238.6 |
| transcriptional regulator | C5L14_08075 | Not Available | Negative | 1768846 - 1769145 | 10933.2 |
| alkene reductase | C5L14_08080 | Not Available | Positive | 1769290 - 1770354 | 37852.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
