Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide permease | C5L14_07625 | Not Available | Positive | 1674397 - 1675356 | 33737.4 |
| peptide abc transporter permease | C5L14_07630 | Not Available | Positive | 1675322 - 1676239 | 32575.8 |
| dihydrodipicolinate synthase family protein | C5L14_07635 | Not Available | Positive | 1676208 - 1677188 | 35171.4 |
| dipeptide abc transporter atp-binding protein dppd | C5L14_07640 | Not Available | Positive | 1677197 - 1678207 | 35693.9 |
| peptide abc transporter atp-binding protein | C5L14_07645 | Not Available | Positive | 1678209 - 1679189 | 35727.3 |
| dihydrodipicolinate synthase family protein | C5L14_07650 | Not Available | Positive | 1679186 - 1680103 | 33070.8 |
| atp phosphoribosyltransferase | C5L14_07655 | Not Available | Negative | 1680253 - 1681239 | 34724.6 |
| atp phosphoribosyltransferase regulatory subunit | C5L14_07660 | Not Available | Negative | 1681239 - 1682354 | 39270.3 |
| histidine--trna ligase | C5L14_07665 | Not Available | Negative | 1682523 - 1683998 | 53384.5 |
| hypothetical protein | C5L14_07670 | Not Available | Positive | 1684523 - 1686220 | 62276.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
