Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_07320 | Not Available | Positive | 1608961 - 1609950 | 34750.0 |
| hypothetical protein | C5L14_07325 | Not Available | Positive | 1610034 - 1611026 | 36727.7 |
| cold-shock protein | C5L14_07330 | Not Available | Positive | 1611260 - 1611469 | 7690.96 |
| Trna-his | Not Available | Not Available | Positive | 1611894 - 1611970 | Not Available |
| phasin | C5L14_07340 | Not Available | Negative | 1612094 - 1612543 | 15851.7 |
| phasin | C5L14_07345 | Not Available | Negative | 1613195 - 1613575 | 13382.9 |
| pas domain-containing sensor histidine kinase | C5L14_07350 | Not Available | Positive | 1614336 - 1616789 | 87846.1 |
| type ii toxin-antitoxin system rele/pare family toxin | C5L14_07355 | Not Available | Negative | 1616812 - 1617123 | 11707.2 |
| type ii toxin-antitoxin system pard family antitoxin | C5L14_07360 | Not Available | Negative | 1617123 - 1617401 | 10428.4 |
| zn-dependent hydrolase | C5L14_07365 | Not Available | Negative | 1617512 - 1618753 | 43431.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
