Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin reductase | C5L14_07115 | Not Available | Positive | 1565134 - 1565733 | 22040.1 |
| large conductance mechanosensitive channel protein mscl | C5L14_07120 | Not Available | Positive | 1565876 - 1566298 | 15033.8 |
| aspartate aminotransferase | C5L14_07125 | Not Available | Positive | 1566464 - 1567642 | 42982.5 |
| hypothetical protein | C5L14_07130 | Not Available | Negative | 1567801 - 1569027 | 45006.4 |
| cold-shock protein | C5L14_07135 | Not Available | Positive | 1569336 - 1569545 | 7509.96 |
| abc transporter | C5L14_07140 | Not Available | Positive | 1569898 - 1572021 | 78569.9 |
| hypothetical protein | C5L14_07145 | Not Available | Negative | 1572097 - 1572561 | 17134.7 |
| histidinol dehydrogenase | C5L14_07155 | Not Available | Negative | 1573705 - 1575000 | 45141.0 |
| duf2948 domain-containing protein | C5L14_07160 | Not Available | Negative | 1575127 - 1575558 | 15759.8 |
| thiamine pyrophosphate-binding protein | C5L14_07165 | Not Available | Positive | 1575780 - 1577477 | 61009.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
