Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metalloprotease htpx | C5L14_07015 | Not Available | Negative | 1546025 - 1546969 | 33448.9 |
| l,d-transpeptidase | C5L14_07020 | Not Available | Negative | 1547186 - 1547896 | 25430.9 |
| 3-isopropylmalate dehydratase small subunit | C5L14_07025 | Not Available | Negative | 1548154 - 1548759 | 22110.4 |
| hypothetical protein | C5L14_07030 | Not Available | Positive | 1548882 - 1549469 | 20832.6 |
| trimethylamine methyltransferase | C5L14_07035 | Not Available | Positive | 1549572 - 1551107 | 55359.9 |
| aa3-type cytochrome c oxidase subunit iv | C5L14_07040 | Not Available | Positive | 1551201 - 1551494 | 10439.0 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit alpha | C5L14_07045 | Not Available | Positive | 1551720 - 1552862 | 39202.4 |
| nad synthetase | C5L14_07050 | Not Available | Positive | 1552995 - 1553498 | 17428.1 |
| nad synthetase | C5L14_07055 | Not Available | Positive | 1553509 - 1553996 | 16198.3 |
| nitroreductase family protein | C5L14_07060 | Not Available | Negative | 1553997 - 1554330 | 12549.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
