Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine biosynthesis protein metw | C5L14_06665 | Not Available | Negative | 1458304 - 1458939 | 23610.3 |
| homoserine o-acetyltransferase | C5L14_06670 | Not Available | Negative | 1458969 - 1460156 | 42952.0 |
| hypothetical protein | C5L14_06675 | Not Available | Positive | 1460388 - 1461368 | 35451.2 |
| hypothetical protein | C5L14_06680 | Not Available | Positive | 1461371 - 1461838 | 16729.6 |
| trna glutamyl-q(34) synthetase gluqrs | C5L14_06685 | Not Available | Negative | 1461981 - 1462886 | 33139.7 |
| fe-s cluster assembly protein hesb | C5L14_06690 | Not Available | Positive | 1462885 - 1463529 | 23275.4 |
| phospholipase | C5L14_06695 | Not Available | Positive | 1463597 - 1464268 | 23985.1 |
| spermidine/putrescine abc transporter substrate-binding protein | C5L14_06700 | Not Available | Positive | 1464389 - 1465630 | 45125.6 |
| 4a-hydroxytetrahydrobiopterin dehydratase | C5L14_06705 | Not Available | Negative | 1465667 - 1465972 | 11315.5 |
| rna 2',3'-cyclic phosphodiesterase | C5L14_06710 | Not Available | Negative | 1466041 - 1466598 | 20542.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
