Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | C5L14_06560 | Not Available | Negative | 1435555 - 1437357 | 67224.9 |
| zinc-binding dehydrogenase | C5L14_06565 | Not Available | Negative | 1437467 - 1438540 | 37827.6 |
| sigma-54-dependent fis family transcriptional regulator | C5L14_06570 | Not Available | Negative | 1438703 - 1440598 | 68613.1 |
| gntr family transcriptional regulator | C5L14_06575 | Not Available | Negative | 1440797 - 1442209 | 49941.9 |
| cupin domain-containing protein | C5L14_06580 | Not Available | Positive | 1442307 - 1442735 | 14848.6 |
| alkylhydroperoxidase | C5L14_06585 | Not Available | Positive | 1442737 - 1443192 | 16361.8 |
| hypothetical protein | C5L14_06590 | Not Available | Positive | 1443228 - 1443431 | 7278.74 |
| hypothetical protein | C5L14_06595 | Not Available | Negative | 1443540 - 1443968 | 15458.7 |
| ybab/ebfc family nucleoid-associated protein | C5L14_06600 | Not Available | Negative | 1443979 - 1444302 | 11521.3 |
| dna polymerase iii subunit gamma/tau | C5L14_06605 | Not Available | Negative | 1444323 - 1446110 | 64158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
