Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | C5L14_06050 | Not Available | Positive | 1334348 - 1335772 | 51817.7 |
| lysine transporter lyse | C5L14_06055 | Not Available | Positive | 1336071 - 1336703 | 22559.5 |
| duf459 domain-containing protein | C5L14_06060 | Not Available | Negative | 1336721 - 1337860 | 40484.1 |
| lytic murein transglycosylase | C5L14_06065 | Not Available | Negative | 1337989 - 1339383 | 50444.6 |
| kpsf/gutq family sugar-phosphate isomerase | C5L14_06070 | Not Available | Positive | 1339481 - 1340449 | 33908.5 |
| heme abc exporter atp-binding protein ccma | C5L14_06075 | Not Available | Positive | 1340464 - 1341066 | 21209.6 |
| heme exporter protein ccmb | C5L14_06080 | Not Available | Positive | 1341164 - 1341832 | 22667.1 |
| lysr family transcriptional regulator | C5L14_06085 | Not Available | Negative | 1341875 - 1342780 | 33315.5 |
| short chain dehydrogenase | C5L14_06090 | Not Available | Positive | 1342904 - 1343677 | 26724.8 |
| heme transporter hemc | C5L14_06095 | Not Available | Positive | 1343804 - 1344562 | 27603.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
