Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_05950 | Not Available | Negative | 1307902 - 1308186 | 10396.6 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | C5L14_05955 | Not Available | Negative | 1308249 - 1310348 | 75289.8 |
| deor family transcriptional regulator | C5L14_05960 | Not Available | Positive | 1310496 - 1311278 | 28222.1 |
| arsr family transcriptional regulator | C5L14_05965 | Not Available | Negative | 1311291 - 1311950 | 24855.7 |
| mfs transporter | C5L14_05970 | Not Available | Positive | 1312062 - 1313243 | 40945.4 |
| mfs transporter | C5L14_05975 | Not Available | Negative | 1313558 - 1314895 | 48421.8 |
| phytanoyl-coa dioxygenase | C5L14_05980 | Not Available | Negative | 1314988 - 1315908 | 33474.0 |
| laci family transcriptional regulator | C5L14_05985 | Not Available | Positive | 1316059 - 1317129 | 38067.1 |
| ribulokinase | C5L14_05990 | Not Available | Positive | 1317481 - 1319097 | 55988.8 |
| hypothetical protein | C5L14_05995 | Not Available | Positive | 1319154 - 1320335 | 40964.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
