Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5L14_05745 | Not Available | Negative | 1264218 - 1264679 | 16111.3 |
| hypothetical protein | C5L14_05750 | Not Available | Negative | 1264702 - 1265178 | 16632.0 |
| diaminopimelate decarboxylase | C5L14_05755 | Not Available | Negative | 1265430 - 1266695 | 45414.7 |
| hypothetical protein | C5L14_05760 | Not Available | Negative | 1266714 - 1266917 | 7183.76 |
| argininosuccinate lyase | C5L14_05765 | Not Available | Negative | 1267015 - 1268397 | 49694.0 |
| hypothetical protein | C5L14_05770 | Not Available | Positive | 1268479 - 1269090 | 20896.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C5L14_05775 | Not Available | Negative | 1269132 - 1269611 | 17123.7 |
| ribosome silencing factor | C5L14_05780 | Not Available | Negative | 1269617 - 1270021 | 14925.2 |
| nicotinic acid mononucleotide adenylyltransferase | C5L14_05785 | Not Available | Negative | 1270168 - 1270800 | 23063.9 |
| 3-isopropylmalate dehydratase large subunit | C5L14_05790 | Not Available | Negative | 1270886 - 1272307 | 50983.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
