Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | C5L14_05495 | Not Available | Negative | 1212759 - 1213691 | 31760.8 |
| duf1223 domain-containing protein | C5L14_05500 | Not Available | Negative | 1213877 - 1214590 | 25131.0 |
| hypothetical protein | C5L14_05505 | Not Available | Positive | 1214924 - 1215784 | 31432.3 |
| cupin | C5L14_05510 | Not Available | Negative | 1215769 - 1216128 | 13163.5 |
| fad-dependent oxidoreductase | C5L14_05515 | Not Available | Negative | 1216175 - 1217560 | 50957.0 |
| spermidine/putrescine abc transporter | C5L14_05520 | Not Available | Negative | 1217656 - 1218801 | 40702.7 |
| polyamine abc transporter permease | C5L14_05525 | Not Available | Negative | 1218803 - 1219591 | 28284.6 |
| abc transporter permease | C5L14_05530 | Not Available | Negative | 1219588 - 1220454 | 31294.8 |
| abc transporter | C5L14_05535 | Not Available | Negative | 1220608 - 1221717 | 39499.9 |
| cupin | C5L14_05540 | Not Available | Negative | 1221722 - 1222414 | 24552.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
