Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein para | C5L14_05035 | Not Available | Positive | 1114244 - 1115050 | 28834.3 |
| chromosome partitioning protein parb | C5L14_05040 | Not Available | Positive | 1115060 - 1115938 | 32271.5 |
| exodeoxyribonuclease iii | C5L14_05045 | Not Available | Positive | 1116153 - 1116974 | 30866.0 |
| duf3108 domain-containing protein | C5L14_05050 | Not Available | Negative | 1117501 - 1118481 | 34216.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | C5L14_05055 | Not Available | Negative | 1118715 - 1119953 | 45653.1 |
| diaminopimelate epimerase | C5L14_05060 | Not Available | Negative | 1119950 - 1120828 | 31052.8 |
| acetyltransferase | C5L14_05065 | Not Available | Negative | 1120896 - 1121483 | 21692.2 |
| aph(3'') family aminoglycoside o-phosphotransferase | C5L14_05070 | Not Available | Positive | 1121585 - 1122403 | 29570.0 |
| glycosyltransferase | C5L14_05075 | Not Available | Negative | 1122370 - 1123473 | 38366.7 |
| hypothetical protein | C5L14_05080 | Not Available | Positive | 1124057 - 1125475 | 50266.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
