Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-aminohexanoate hydrolase | C5L14_04985 | Not Available | Positive | 1100928 - 1102115 | 42760.2 |
| hypothetical protein | C5L14_04990 | Not Available | Negative | 1102075 - 1102578 | 17400.8 |
| phosphoenolpyruvate synthase regulatory protein | C5L14_04995 | Not Available | Negative | 1102770 - 1103609 | 31286.8 |
| uroporphyrinogen decarboxylase | C5L14_05000 | Not Available | Positive | 1104155 - 1105177 | 37069.9 |
| protoporphyrinogen oxidase hemj | C5L14_05005 | Not Available | Positive | 1105427 - 1105867 | 16716.0 |
| transcription termination factor rho | C5L14_05010 | Not Available | Positive | 1106110 - 1107375 | 47146.1 |
| thioredoxin domain-containing protein | C5L14_05015 | Not Available | Negative | 1107749 - 1109773 | 73504.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C5L14_05020 | Not Available | Positive | 1109883 - 1111205 | 46587.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | C5L14_05025 | Not Available | Positive | 1111487 - 1113352 | 67157.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | C5L14_05030 | Not Available | Positive | 1113560 - 1114204 | 23464.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
