Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Xanthobacteraceae
Genus
Labrys
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Xanthobacteraceae |
| Genus | Labrys |
| Species | Labrys okinawensis |
| Strain | strain RP1T |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169800 bp
Thymine Count
1170584 bp
Guanine Count
2091351 bp
Cytosine Count
2076605 bp
Genome Length
6508340 bp
Protein-coding Genes
5835 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | C5L14_00450 | Not Available | Negative | 94361 - 94795 | 15113.1 |
| hypothetical protein | C5L14_00455 | Not Available | Positive | 95061 - 95432 | 13897.8 |
| had family hydrolase | C5L14_00460 | Not Available | Positive | 95748 - 96434 | 24914.8 |
| thiamine pyrophosphate-requiring protein | C5L14_00465 | Not Available | Positive | 96529 - 98325 | 65010.2 |
| hypothetical protein | C5L14_00470 | Not Available | Positive | 98396 - 98626 | 8647.44 |
| ggdef-domain containing protein | C5L14_00475 | Not Available | Positive | 99249 - 101273 | 75900.1 |
| vitamin b12-dependent ribonucleotide reductase | C5L14_00480 | Not Available | Positive | 101864 - 104980 | 114071.0 |
| abc transporter permease | C5L14_00485 | Not Available | Negative | 105553 - 106587 | 35897.7 |
| hypothetical protein | C5L14_00490 | Not Available | Negative | 106599 - 107585 | 34753.9 |
| d-xylose abc transporter atp-binding protein | C5L14_00495 | Not Available | Negative | 107593 - 109098 | 54188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
