Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein | C5C39_04535 | Not Available | Positive | 956022 - 956504 | 16072.2 |
| xre family transcriptional regulator | C5C39_04540 | Not Available | Positive | 956750 - 957058 | 11013.3 |
| duf3046 domain-containing protein | C5C39_04545 | Not Available | Positive | 957180 - 957404 | 8401.96 |
| recombinase reca | C5C39_04550 | Not Available | Positive | 957685 - 958752 | 38103.8 |
| hypothetical protein | C5C39_04555 | Not Available | Positive | 958756 - 959574 | 29190.2 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | C5C39_04560 | Not Available | Positive | 959621 - 961189 | 56682.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | C5C39_04565 | Not Available | Positive | 961176 - 962147 | 34951.6 |
| diaminopimelate epimerase | C5C39_04570 | Not Available | Positive | 962158 - 963039 | 30729.3 |
| 16s rrna methyltransferase | C5C39_04575 | Not Available | Negative | 963048 - 963659 | 22258.6 |
| gtpase hflx | C5C39_04580 | Not Available | Positive | 963703 - 965241 | 55088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
