Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | C5C39_04180 | Not Available | Negative | 881588 - 882118 | 18662.1 |
| mfs transporter | C5C39_04185 | Not Available | Positive | 882295 - 883746 | 48568.3 |
| 3-isopropylmalate dehydrogenase | C5C39_04190 | Not Available | Positive | 883902 - 884951 | 36637.4 |
| branched chain amino acid aminotransferase | C5C39_04195 | Not Available | Positive | 884977 - 886083 | 40079.1 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | C5C39_04200 | Not Available | Positive | 886080 - 886865 | 27777.9 |
| hypothetical protein | C5C39_04205 | Not Available | Negative | 886953 - 887219 | 8156.73 |
| recombinase recq | C5C39_04210 | Not Available | Positive | 887398 - 889038 | 58709.0 |
| hypothetical protein | C5C39_04215 | Not Available | Negative | 889139 - 889330 | 6723.76 |
| glycosyl transferase | C5C39_04220 | Not Available | Negative | 889361 - 890173 | 30127.6 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | C5C39_04225 | Not Available | Negative | 890227 - 891699 | 50886.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
