Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine phosphorylase | C5C39_00340 | Not Available | Negative | 77365 - 78672 | 46069.2 |
| cytidine deaminase | C5C39_00345 | Not Available | Negative | 78714 - 79118 | 14147.0 |
| abc transporter permease | C5C39_00350 | Not Available | Negative | 79130 - 80395 | 43721.4 |
| abc transporter permease | C5C39_00355 | Not Available | Negative | 80392 - 81543 | 39936.3 |
| heme abc transporter atp-binding protein | C5C39_00360 | Not Available | Negative | 81699 - 83219 | 54687.1 |
| bmp family abc transporter substrate-binding protein | C5C39_00365 | Not Available | Negative | 83366 - 84451 | 36762.5 |
| mannose-1-phosphate guanylyltransferase | C5C39_00370 | Not Available | Negative | 85110 - 86243 | 39706.3 |
| glycosyl transferase | C5C39_00375 | Not Available | Positive | 86242 - 87456 | 42843.3 |
| succinate dehydrogenase, cytochrome b556 subunit | C5C39_00380 | Not Available | Positive | 87683 - 88027 | 12719.8 |
| succinate dehydrogenase | C5C39_00385 | Not Available | Positive | 88024 - 88467 | 15861.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
