Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter sp. AY1F3 |
| Strain | AY1F3_98 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
499815 bp
Thymine Count
501553 bp
Guanine Count
1316010 bp
Cytosine Count
1306470 bp
Genome Length
3624054 bp
Protein-coding Genes
3334 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | C5C39_03680 | Not Available | Negative | 767417 - 768256 | 28128.4 |
| hypothetical protein | C5C39_03685 | Not Available | Negative | 768578 - 769624 | 37505.6 |
| hypothetical protein | C5C39_03690 | Not Available | Negative | 769617 - 770993 | 48967.0 |
| magnesium and cobalt transport protein cora | C5C39_03695 | Not Available | Negative | 771199 - 772221 | 38530.9 |
| guab1 family imp dehydrogenase-related protein | C5C39_03700 | Not Available | Negative | 772250 - 773689 | 49587.1 |
| multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit | C5C39_03705 | Not Available | Positive | 773835 - 777671 | 140310.0 |
| alpha-ketoglutarate decarboxylase | C5C39_03710 | Not Available | Negative | 777906 - 778169 | 9436.17 |
| rna polymerase subunit sigma-70 | C5C39_03715 | Not Available | Negative | 778166 - 778867 | 26283.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C5C39_03720 | Not Available | Positive | 779032 - 780387 | 46418.2 |
| ribosome small subunit-dependent gtpase a | C5C39_03725 | Not Available | Positive | 780391 - 781467 | 38690.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
